PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0024s0049.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 227aa    MW: 25682.2 Da    PI: 10.6118
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0024s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71.1e-11105146351
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +GV++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kalax.0024s0049.1.p 105 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAF 146
                          79**98..47*********4.....5********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-4104161IPR001471AP2/ERF domain
PfamPF008476.9E-6104147IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-8105149IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.0E-7107151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPGQSS FGGPLAETSS KGNKTDLPPL VSKPISMRTI LPGVEQTTKD  60
DFKPISNHFS GSSTTKEQPG RPISEFKRRK RHRRKQIQDQ ETCLMRGVYF KNMKWQAAIK  120
VDKKQIHLGT VGTQEEAAHL YDRAAFMCGR EPNFELSEEE KQELKRLNWD EFLTMTRSTI  180
TNKKHQRRRL VTSRLRSVLS SQLCSDTDVG QGVQSSTPSD EKGLDT*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006443559.15e-68hypothetical protein CICLE_v10021891mg
RefseqXP_006443558.15e-68hypothetical protein CICLE_v10021891mg
RefseqXP_006443557.15e-68hypothetical protein CICLE_v10021891mg
RefseqXP_006443556.15e-68hypothetical protein CICLE_v10021891mg
RefseqXP_006479237.15e-68PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_006479236.15e-68PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_006479235.15e-68PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A067FF446e-68A0A067FF44_CITSI; Uncharacterized protein
TrEMBLV4T9416e-68V4T941_9R
STRINGGSMUA_Achr8P00300_0014e-64(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-47ERF family protein